edu.wisc.ssec.mcidasv.data

Class BadNetCDFWidget

java.lang.Object

edu.wisc.ssec.mcidasv.data.BadNetCDFWidget

All Implemented Interfaces:

Constants, ucar.unidata.idv.IdvConstants

public class BadNetCDFWidget
extends java.lang.Object
implements Constants

GUI widget that allows users to attempt to specify an "NCML" if a given NetCDF is not CF-compliant.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	BadNetCDFWidget.BadNetCDFDialog

Field Summary

Fields

Modifier and Type	Field and Description
(package private) ConstantMap[]	cmaps
(package private) BasicSSCell	display
private ucar.unidata.idv.IntegratedDataViewer	idv
private javax.swing.JComboBox	latComboBox
private static org.slf4j.Logger	logger
private javax.swing.JComboBox	lonComboBox
private ucar.nc2.dataset.NetcdfDataset	ncFile
private javax.swing.JEditorPane	NcMLeditor
private javax.swing.JPanel	panelLatLonBounds
private javax.swing.JPanel	panelLatLonVars
private javax.swing.JRadioButton	radioLatLonBounds
private javax.swing.JRadioButton	radioLatLonVars
private javax.swing.JComboBox	refComboBox
private javax.swing.JTextField	textLatLR
private javax.swing.JTextField	textLatUL
private javax.swing.JTextField	textLonLR
private javax.swing.JTextField	textLonUL
private java.util.List<ucar.nc2.Variable>	varList
private java.util.List<java.lang.String>	varNames

Fields inherited from interface edu.wisc.ssec.mcidasv.Constants

BLANK_COMP_GROUP, COMP_MONITORPANEL, DATASELECTOR_NAME, DEFAULT_DOCPATH, DEFAULT_SERVERSTATE, DISPLAY_NAME, DISPLAYCONTROLLER_NAME, ELEMENT_DOUBLE_WIDTH, ELEMENT_DOUBLEDOUBLE_WIDTH, ELEMENT_HALF_WIDTH, ELEMENT_ONEHALF_WIDTH, ELEMENT_WIDTH, EVENT_FILECHOOSER_START, EVENT_FILECHOOSER_STOP, FILTER_MCV, FILTER_MCVMCVZ, FILTER_MCVZ, GAP_RELATED, GAP_UNRELATED, HOMEPAGE_URL, ICON_ACCEPT_SMALL, ICON_ADD_SMALL, ICON_APPLY_SMALL, ICON_BACKGROUND_SMALL, ICON_CANCEL, ICON_CANCEL_SMALL, ICON_CHECKVERSION_SMALL, ICON_COLORTABLE_SMALL, ICON_CONNECT_SMALL, ICON_CONSOLE_SMALL, ICON_DATAEXPLORER_SMALL, ICON_DEFAULTLAYOUT_SMALL, ICON_DEFAULTLAYOUTADD_SMALL, ICON_DEFAULTLAYOUTDELETE_SMALL, ICON_DELETE_SMALL, ICON_DISCONNECT_SMALL, ICON_ERROR_SMALL, ICON_EXCLAMATION_SMALL, ICON_FAVORITE_SMALL, ICON_FAVORITEMANAGE_SMALL, ICON_FAVORITESAVE_SMALL, ICON_FORUMS_SMALL, ICON_GETTINGSTARTED_SMALL, ICON_HELP, ICON_HELP_SMALL, ICON_HELPTIPS_SMALL, ICON_INFORMATION_SMALL, ICON_LAYOUTEDIT_SMALL, ICON_LOCALDATA_SMALL, ICON_LOCATION_SMALL, ICON_MCIDASV_DEFAULT, ICON_MCIDASV_SMALL, ICON_NEWTAB_SMALL, ICON_NEWWINDOW_SMALL, ICON_NEXT_SMALL, ICON_NOTE_SMALL, ICON_OPEN, ICON_OPEN_SMALL, ICON_PREFERENCES_SMALL, ICON_PREVIOUS_SMALL, ICON_RANDOM_SMALL, ICON_RANGEANDBEARING_SMALL, ICON_REDO_SMALL, ICON_REFRESH, ICON_REFRESH_SMALL, ICON_REMOVE_SMALL, ICON_REMOVEDATA_SMALL, ICON_REMOVELAYERS_SMALL, ICON_REMOVELAYERSDATA_SMALL, ICON_SAVE, ICON_SAVE_SMALL, ICON_SAVEAS_SMALL, ICON_SUPPORT_SMALL, ICON_UNDO_SMALL, ICON_UPDATE, ICON_USERSGUIDE_SMALL, LOCAL_ADDE_PORT, MACRO_BUILDDATE, MACRO_COPYRIGHT_YEAR, MACRO_GRANULE_COUNT, MACRO_IDV_VERSION, MACRO_VERSION, MACRO_VISAD_VERSION, MAX_MEMORY_32BIT, MCV_BLUE, MCV_BLUE_DARK, NOTICE_URL, OS_OSX, PANEL_NAME, PREF_AUTO_SAVE_DEFAULT_LAYOUT, PREF_CONFIRM_REMOVE_BOTH, PREF_CONFIRM_REMOVE_DATA, PREF_CONFIRM_REMOVE_LAYERS, PREF_IMAGE_PREVIEW, PREF_LIST_ADDE_SERVERS, PREF_LIST_ADVANCED, PREF_LIST_AVAILABLE_DISPLAYS, PREF_LIST_DATA_CHOOSERS, PREF_LIST_FORMATS_DATA, PREF_LIST_GENERAL, PREF_LIST_LOCAL_ADDE, PREF_LIST_NAV_CONTROLS, PREF_LIST_TOOLBAR, PREF_LIST_VIEW, PREF_OPEN_LIMIT_WIN, PREF_PRERELEASE_CHECK, PREF_SAVE_DASHBOARD_VIZ, PREF_SERVERSTATE, PREF_SHOW_SYSTEM_BUNDLES, PREF_SYSTEMSERVERSIMG, PREF_TBM_SIZE, PREF_VERSION_CHECK, PREF_VIIRS_PLUGIN, PRERELEASE_URL, PROP_ABOUTTEXT, PROP_APP_ICON, PROP_BUILD_DATE, PROP_CHAN, PROP_COPYRIGHT_YEAR, PROP_DASHBOARD_BOUNDS, PROP_GRANULE_COUNT, PROP_HOMEPAGE, PROP_HYDRA_360, PROP_RECENT_COLORS, PROP_SERVERS, PROP_SERVERS_ALL, PROP_SYSMEM, PROP_TABBED_UI, PROP_VERSION_MAJOR, PROP_VERSION_MINOR, PROP_VERSION_RELEASE, PROP_VERSIONFILE, PROP_VISAD_DATE, PROP_VISAD_ORIGINAL, PROP_VISAD_PARSE_FAIL, PROP_VISAD_REVISION, PROP_VP_CATOPEN, PROP_VP_SHOWCATS, PROP_VP_SHOWPOPUP, PROPERTIES_FILE, SCRUB_STRINGS_FILE, SUFFIX_MCV, SUFFIX_MCVZ, TOOLTIP_PROGRESSIVE_RESOLUTION, USER_DIRECTORY_NAME, VERSION_HANDLER_URL, VERSION_URL, VIIRS_PLUGIN_VERSION_NUMBER

Fields inherited from interface ucar.unidata.idv.IdvConstants

ARG_B64BUNDLE, ARG_B64ISL, ARG_BUNDLE, ARG_CATALOG, ARG_CHOOSER, ARG_CLEARDEFAULT, ARG_CODE, ARG_CONNECT, ARG_CURRENTTIME, ARG_DATA, ARG_DEBUG, ARG_DEFAULT, ARG_DISPLAY, ARG_DXML, ARG_FIXEDTIME, ARG_HELP, ARG_IMAGE, ARG_IMAGESERVER, ARG_INSTALLPLUGIN, ARG_ISLFILE, ARG_ISLINTERACTIVE, ARG_LISTRESOURCES, ARG_MAINCLASS, ARG_MOVIE, ARG_MSG_DEBUG, ARG_MSG_RECORD, ARG_NODEFAULT, ARG_NOERRORSINGUI, ARG_NOGUI, ARG_NOONEINSTANCE, ARG_NOPLUGINS, ARG_NOPREF, ARG_ONEINSTANCEPORT, ARG_PLUGIN, ARG_PORT, ARG_PRINTJNLP, ARG_PROPERTIES, ARG_SCRIPT, ARG_SERVER, ARG_SETFILES, ARG_SITEPATH, ARG_TEMPLATE, ARG_TEST, ARG_TESTEVAL, ARG_TRACE, ARG_TRACEONLY, ARG_USERPATH, DEFAULT_DATE_FORMAT, DEFAULT_TIMEZONE, FILTER_CPT, FILTER_ISL, FILTER_JNLP, FILTER_XIDV, FILTER_XIDVZIDV, FILTER_XML, FILTER_ZIDV, ID_COMMANDSTORUN, ID_DATASOURCES, ID_DISPLAYCONTROLS, ID_IDV, ID_JYTHON, ID_MESSAGE, ID_MISCHASHTABLE, ID_NCIDV_VERSION, ID_VERSION, ID_VIEWMANAGERS, ID_WINDOWS, INITIAL_PROBE_EARTHLOCATION, NULL_DATA_SELECTION, NULL_STRING, PREF_ARCHIVEDIR, PREF_ARCHIVENAME, PREF_AUTODISPLAYS_ENABLE, PREF_AUTODISPLAYS_SHOWGUI, PREF_AUTOSELECTDATA, PREF_CACHESIZE, PREF_CONTROLSINTABS, PREF_DATAPREFIX, PREF_DATE_FORMAT, PREF_DISTANCEUNIT, PREF_DOCACHE, PREF_EMBEDDATACHOOSERINDASHBOARD, PREF_EMBEDFIELDSELECTORINDASHBOARD, PREF_EMBEDLEGENDINDASHBOARD, PREF_EMBEDQUICKLINKSINDASHBOARD, PREF_EVENT_KEYBOARDMAP, PREF_EVENT_MOUSEMAP, PREF_EVENT_WHEELMAP, PREF_FAST_RENDER, PREF_FIELD_CACHETHRESHOLD, PREF_FILEREADDIR, PREF_FILEWRITEDIR, PREF_GEOMETRY_BY_REF, PREF_HISTORY, PREF_IMAGE_BY_REF, PREF_LARGE_REMOTE_DATA_WARN, PREF_LASTVERSION, PREF_LATLON_FORMAT, PREF_LEGEND_SHOWICONS, PREF_LOCALE, PREF_LOOKANDFEEL, PREF_MAXIMAGESIZE, PREF_MEMORY, PREF_NPOT_IMAGE, PREF_OPEN_ASK, PREF_OPEN_MERGE, PREF_OPEN_REMOVE, PREF_PROJ_LIST, PREF_SAMPLINGMODE, PREF_SHOWCONTROLWINDOW, PREF_SHOWDASHBOARD, PREF_SHOWDECODEDIALOG, PREF_SHOWHIDDENFILES, PREF_SHOWQUITCONFIRM, PREF_SITEPATH, PREF_THREADS_DATA, PREF_THREADS_RENDER, PREF_TIMEZONE, PREF_VERTICALCS, PREF_VERTICALUNIT, PREF_WINDOW_SHOWTOOLBAR, PREF_ZIDV_ASK, PREF_ZIDV_DIRECTORY, PREF_ZIDV_SAVETOTMP, PROP_3DMODE, PROP_APPRESOURCEPATH, PROP_CHOOSERS, PROP_CHOOSERS_ALL, PROP_CONTROLDESCRIPTORS, PROP_CONTROLDESCRIPTORS_ALL, PROP_DATAHOLDERBOUNDS, PROP_DEFAULTLOCATIONS, PROP_DISPLAYLIST_GROUP, PROP_FIXFILELOCKUP, PROP_JNLPCODEBASE, PROP_JNLPTEMPLATE, PROP_JNLPTITLE, PROP_LOADINGXML, PROP_MAP_GLOBE_LEVEL, PROP_MAP_MAP_LEVEL, PROP_MINIMUMFRAMECYCLETIME, PROP_MONITORPORT, PROP_OLDCONTROLDESCRIPTORS, PROP_ONEINSTANCEPORT, PROP_PREFERENCES, PROP_PROJ_NAME, PROP_RESOURCEFILES, PROP_SHOWCLOCK_DASH, PROP_SHOWCLOCK_VIEW, PROP_SHOWDASHBOARD, PROP_SHOWDATATREE, PROP_SHOWFORMULAS, PROP_SHOWSPLASH, PROP_SPLASHICON, PROP_UI_DESKTOP, PROP_USE_DISPLAYAREA, PROP_USE_TIMEDRIVER, PROP_WINDOW_SCREENSIZEOFFSET, PROP_WINDOW_SIZEHEIGHT, PROP_WINDOW_SIZEWIDTH, PROP_WINDOW_USESCREENSIZE, SUFFIX_BAT, SUFFIX_CPT, SUFFIX_ISL, SUFFIX_JNLP, SUFFIX_RBI, SUFFIX_SH, SUFFIX_XIDV, SUFFIX_XML, SUFFIX_ZIDV

Constructor Summary

Constructors

Constructor and Description
BadNetCDFWidget(ucar.nc2.dataset.NetcdfDataset ncFile, ucar.unidata.idv.IntegratedDataViewer idv) Handles problems from openDataset.
BadNetCDFWidget(java.lang.String filepath) Passes through any exception from openDataset - this function doesn't provide an IDV and should only be used for testing.

Method Summary

Modifier and Type	Method and Description
private void	checkSetLatLon() Enable or disable widgets for navigation.
private void	createIDVdisplay() Takes our ncFile and puts it back into IDV (McV).
static void	main(java.lang.String... args) Tester function to pick a file and send it through the paces.
private void	navCornersAction() One of the two workhorses of our nav chooser, it creates new variables for lat/lon based on the specified cornerpoints and reference variable (for dimensions).
private void	navVarAction() One of the two workhorses of our nav chooser, it alters the chosen (existing) variables so they can be used as lat/lon pairs.
private static float[][]	reshape(float[] arr, int m, int n) Reshape a 1D float array into a 2D float array.
void	showChoices() Displays our "main menu" of choices to fix the given file.
private void	showNavChooser() Shows a window that gives the opportunity to either define coordinate variables or specify corner points.
private void	showNcMLEditor() Creates an editor for NcML and displays it in a window.
private void	showVarPicker() Shows a window that gives a choice of variables.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

private static final org.slf4j.Logger logger

idv

private ucar.unidata.idv.IntegratedDataViewer idv

ncFile

private ucar.nc2.dataset.NetcdfDataset ncFile

varList

private java.util.List<ucar.nc2.Variable> varList

varNames

private java.util.List<java.lang.String> varNames

NcMLeditor

private javax.swing.JEditorPane NcMLeditor

display

BasicSSCell display

cmaps

ConstantMap[] cmaps

radioLatLonVars

private javax.swing.JRadioButton radioLatLonVars

radioLatLonBounds

private javax.swing.JRadioButton radioLatLonBounds

refComboBox

private javax.swing.JComboBox refComboBox

latComboBox

private javax.swing.JComboBox latComboBox

lonComboBox

private javax.swing.JComboBox lonComboBox

panelLatLonVars

private javax.swing.JPanel panelLatLonVars

panelLatLonBounds

private javax.swing.JPanel panelLatLonBounds

textLatUL

private javax.swing.JTextField textLatUL

textLonUL

private javax.swing.JTextField textLonUL

textLatLR

private javax.swing.JTextField textLatLR

textLonLR

private javax.swing.JTextField textLonLR

Constructor Detail

BadNetCDFWidget

public BadNetCDFWidget(ucar.nc2.dataset.NetcdfDataset ncFile,
                       ucar.unidata.idv.IntegratedDataViewer idv)

Handles problems from openDataset.

Parameters:

ncFile - NetCDF that caused a problem. Cannot be null.

idv - Reference to the IDV. Cannot be null.

BadNetCDFWidget

public BadNetCDFWidget(java.lang.String filepath)
                throws java.io.IOException

Passes through any exception from openDataset - this function doesn't provide an IDV and should only be used for testing. (Some functionality using the rest of the IDV won't work.)

Parameters:

filepath - Path to a NetCDF file.

Throws:

java.io.IOException - if there was a problem.

Method Detail

showChoices

public void showChoices()

Displays our "main menu" of choices to fix the given file. Everything else needed can get called from here.

showNcMLEditor

private void showNcMLEditor()

Creates an editor for NcML and displays it in a window. This includes buttons for saving just the NcML and the full NetCDF file with the changes made.

createIDVdisplay

private void createIDVdisplay()

Takes our ncFile and puts it back into IDV (McV).

showVarPicker

private void showVarPicker()

Shows a window that gives a choice of variables.

reshape

private static float[][] reshape(float[] arr,
                                 int m,
                                 int n)

Reshape a 1D float array into a 2D float array.

Parameters:

arr - Array to reshape.

m - First dimension.

n - Second dimension.

Returns:

arr reshaped into a new 2D array.

showNavChooser

private void showNavChooser()

Shows a window that gives the opportunity to either define coordinate variables or specify corner points. Borrowed heavily from FlatFileChooser's makeNavigationPanel for style.

checkSetLatLon

private void checkSetLatLon()

Enable or disable widgets for navigation.

navVarAction

private void navVarAction()

One of the two workhorses of our nav chooser, it alters the chosen (existing) variables so they can be used as lat/lon pairs.

navCornersAction

private void navCornersAction()

One of the two workhorses of our nav chooser, it creates new variables for lat/lon based on the specified cornerpoints and reference variable (for dimensions).

main

public static void main(java.lang.String... args)

Tester function to pick a file and send it through the paces.

Parameters:

args - Incoming arguments.