edu.wisc.ssec.mcidasv.data

Class BadNetCDFWidget

java.lang.Object

edu.wisc.ssec.mcidasv.data.BadNetCDFWidget

All Implemented Interfaces:

Constants, IdvConstants

public class BadNetCDFWidget
extends Object
implements Constants

GUI widget that allows users to attempt to specify an "NCML" if a given NetCDF is not CF-compliant.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	BadNetCDFWidget.BadNetCDFDialog

Field Summary

Fields

Modifier and Type	Field and Description
(package private) ConstantMap[]	cmaps
(package private) BasicSSCell	display
private IntegratedDataViewer	idv
private JComboBox	latComboBox
private static org.slf4j.Logger	logger
private JComboBox	lonComboBox
private NetcdfDataset	ncFile
private JEditorPane	NcMLeditor
private JPanel	panelLatLonBounds
private JPanel	panelLatLonVars
private JRadioButton	radioLatLonBounds
private JRadioButton	radioLatLonVars
private JComboBox	refComboBox
private JTextField	textLatLR
private JTextField	textLatUL
private JTextField	textLonLR
private JTextField	textLonUL
private List<Variable>	varList
private List<String>	varNames

Fields inherited from interface edu.wisc.ssec.mcidasv.Constants

BLANK_COMP_GROUP, COMP_MONITORPANEL, DATASELECTOR_NAME, DEFAULT_DOCPATH, DEFAULT_SERVERSTATE, DISPLAY_NAME, DISPLAYCONTROLLER_NAME, ELEMENT_DOUBLE_WIDTH, ELEMENT_DOUBLEDOUBLE_WIDTH, ELEMENT_HALF_WIDTH, ELEMENT_ONEHALF_WIDTH, ELEMENT_WIDTH, EVENT_FILECHOOSER_START, EVENT_FILECHOOSER_STOP, FILTER_MCV, FILTER_MCVMCVZ, FILTER_MCVZ, GAP_RELATED, GAP_UNRELATED, HOMEPAGE_URL, ICON_ACCEPT_SMALL, ICON_ADD_SMALL, ICON_APPLY_SMALL, ICON_BACKGROUND_SMALL, ICON_CANCEL, ICON_CANCEL_SMALL, ICON_CHECKVERSION_SMALL, ICON_COLORTABLE_SMALL, ICON_CONNECT_SMALL, ICON_CONSOLE_SMALL, ICON_DATAEXPLORER_SMALL, ICON_DEFAULTLAYOUT_SMALL, ICON_DEFAULTLAYOUTADD_SMALL, ICON_DEFAULTLAYOUTDELETE_SMALL, ICON_DELETE_SMALL, ICON_DISCONNECT_SMALL, ICON_ERROR_SMALL, ICON_EXCLAMATION_SMALL, ICON_FAVORITE_SMALL, ICON_FAVORITEMANAGE_SMALL, ICON_FAVORITESAVE_SMALL, ICON_FORUMS_SMALL, ICON_GETTINGSTARTED_SMALL, ICON_HELP, ICON_HELP_SMALL, ICON_HELPTIPS_SMALL, ICON_INFORMATION_SMALL, ICON_LAYOUTEDIT_SMALL, ICON_LOCALDATA_SMALL, ICON_LOCATION_SMALL, ICON_MCIDASV_SMALL, ICON_NEWTAB_SMALL, ICON_NEWWINDOW_SMALL, ICON_NEXT_SMALL, ICON_NOTE_SMALL, ICON_OPEN, ICON_OPEN_SMALL, ICON_PREFERENCES_SMALL, ICON_PREVIOUS_SMALL, ICON_RANDOM_SMALL, ICON_RANGEANDBEARING_SMALL, ICON_REDO_SMALL, ICON_REFRESH, ICON_REFRESH_SMALL, ICON_REMOVE_SMALL, ICON_REMOVEDATA_SMALL, ICON_REMOVELAYERS_SMALL, ICON_REMOVELAYERSDATA_SMALL, ICON_SAVE, ICON_SAVE_SMALL, ICON_SAVEAS_SMALL, ICON_SUPPORT_SMALL, ICON_UNDO_SMALL, ICON_UPDATE, ICON_USERSGUIDE_SMALL, LOCAL_ADDE_PORT, MACRO_BUILDDATE, MACRO_COPYRIGHT_YEAR, MACRO_GRANULE_COUNT, MACRO_IDV_VERSION, MACRO_VERSION, MACRO_VISAD_VERSION, MAX_MEMORY_32BIT, MCV_BLUE, MCV_BLUE_DARK, NOTICE_URL, OS_OSX, PANEL_NAME, PREF_AUTO_SAVE_DEFAULT_LAYOUT, PREF_CONFIRM_REMOVE_BOTH, PREF_CONFIRM_REMOVE_DATA, PREF_CONFIRM_REMOVE_LAYERS, PREF_IMAGE_PREVIEW, PREF_LIST_ADDE_SERVERS, PREF_LIST_ADVANCED, PREF_LIST_AVAILABLE_DISPLAYS, PREF_LIST_DATA_CHOOSERS, PREF_LIST_FORMATS_DATA, PREF_LIST_GENERAL, PREF_LIST_LOCAL_ADDE, PREF_LIST_NAV_CONTROLS, PREF_LIST_TOOLBAR, PREF_LIST_VIEW, PREF_OPEN_LIMIT_WIN, PREF_PRERELEASE_CHECK, PREF_SAVE_DASHBOARD_VIZ, PREF_SERVERSTATE, PREF_SHOW_SYSTEM_BUNDLES, PREF_SYSTEMSERVERSIMG, PREF_TBM_SIZE, PREF_VERSION_CHECK, PREF_VIIRS_PLUGIN, PRERELEASE_URL, PROP_ABOUTTEXT, PROP_APP_ICON, PROP_BUILD_DATE, PROP_CHAN, PROP_COPYRIGHT_YEAR, PROP_DASHBOARD_BOUNDS, PROP_GRANULE_COUNT, PROP_HOMEPAGE, PROP_HYDRA_360, PROP_RECENT_COLORS, PROP_SERVERS, PROP_SERVERS_ALL, PROP_SYSMEM, PROP_TABBED_UI, PROP_VERSION_MAJOR, PROP_VERSION_MINOR, PROP_VERSION_RELEASE, PROP_VERSIONFILE, PROP_VISAD_DATE, PROP_VISAD_ORIGINAL, PROP_VISAD_PARSE_FAIL, PROP_VISAD_REVISION, PROP_VP_CATOPEN, PROP_VP_SHOWCATS, PROP_VP_SHOWPOPUP, PROPERTIES_FILE, SCRUB_STRINGS_FILE, SUFFIX_MCV, SUFFIX_MCVZ, TOOLTIP_PROGRESSIVE_RESOLUTION, USER_DIRECTORY_NAME, VERSION_HANDLER_URL, VERSION_URL, VIIRS_PLUGIN_VERSION_NUMBER

Fields inherited from interface ucar.unidata.idv.IdvConstants

ARG_B64BUNDLE, ARG_B64ISL, ARG_BUNDLE, ARG_CATALOG, ARG_CHOOSER, ARG_CLEARDEFAULT, ARG_CODE, ARG_CONNECT, ARG_CURRENTTIME, ARG_DATA, ARG_DEBUG, ARG_DEFAULT, ARG_DISPLAY, ARG_DXML, ARG_FIXEDTIME, ARG_HELP, ARG_IMAGE, ARG_IMAGESERVER, ARG_INSTALLPLUGIN, ARG_ISLFILE, ARG_ISLINTERACTIVE, ARG_LISTRESOURCES, ARG_MAINCLASS, ARG_MOVIE, ARG_MSG_DEBUG, ARG_MSG_RECORD, ARG_NODEFAULT, ARG_NOERRORSINGUI, ARG_NOGUI, ARG_NOONEINSTANCE, ARG_NOPLUGINS, ARG_NOPREF, ARG_ONEINSTANCEPORT, ARG_PLUGIN, ARG_PORT, ARG_PRINTJNLP, ARG_PROPERTIES, ARG_SCRIPT, ARG_SERVER, ARG_SETFILES, ARG_SITEPATH, ARG_TEMPLATE, ARG_TEST, ARG_TESTEVAL, ARG_TRACE, ARG_TRACEONLY, ARG_USERPATH, DEFAULT_DATE_FORMAT, DEFAULT_TIMEZONE, FILTER_CPT, FILTER_ISL, FILTER_JNLP, FILTER_XIDV, FILTER_XIDVZIDV, FILTER_XML, FILTER_ZIDV, ID_COMMANDSTORUN, ID_DATASOURCES, ID_DISPLAYCONTROLS, ID_IDV, ID_JYTHON, ID_MESSAGE, ID_MISCHASHTABLE, ID_NCIDV_VERSION, ID_VERSION, ID_VIEWMANAGERS, ID_WINDOWS, INITIAL_PROBE_EARTHLOCATION, NULL_DATA_SELECTION, NULL_STRING, PREF_ARCHIVEDIR, PREF_ARCHIVENAME, PREF_AUTODISPLAYS_ENABLE, PREF_AUTODISPLAYS_SHOWGUI, PREF_AUTOSELECTDATA, PREF_CACHESIZE, PREF_CONTROLSINTABS, PREF_DATAPREFIX, PREF_DATE_FORMAT, PREF_DISTANCEUNIT, PREF_DOCACHE, PREF_EMBEDDATACHOOSERINDASHBOARD, PREF_EMBEDFIELDSELECTORINDASHBOARD, PREF_EMBEDLEGENDINDASHBOARD, PREF_EMBEDQUICKLINKSINDASHBOARD, PREF_EVENT_KEYBOARDMAP, PREF_EVENT_MOUSEMAP, PREF_EVENT_WHEELMAP, PREF_FAST_RENDER, PREF_FIELD_CACHETHRESHOLD, PREF_FILEREADDIR, PREF_FILEWRITEDIR, PREF_GEOMETRY_BY_REF, PREF_HISTORY, PREF_IMAGE_BY_REF, PREF_LARGE_REMOTE_DATA_WARN, PREF_LASTVERSION, PREF_LATLON_FORMAT, PREF_LEGEND_SHOWICONS, PREF_LOCALE, PREF_LOOKANDFEEL, PREF_MAXIMAGESIZE, PREF_MEMORY, PREF_NPOT_IMAGE, PREF_OPEN_ASK, PREF_OPEN_MERGE, PREF_OPEN_REMOVE, PREF_PROJ_LIST, PREF_SAMPLINGMODE, PREF_SHOWCONTROLWINDOW, PREF_SHOWDASHBOARD, PREF_SHOWDECODEDIALOG, PREF_SHOWHIDDENFILES, PREF_SHOWQUITCONFIRM, PREF_SITEPATH, PREF_THREADS_DATA, PREF_THREADS_RENDER, PREF_TIMEZONE, PREF_VERTICALCS, PREF_VERTICALUNIT, PREF_WINDOW_SHOWTOOLBAR, PREF_ZIDV_ASK, PREF_ZIDV_DIRECTORY, PREF_ZIDV_SAVETOTMP, PROP_3DMODE, PROP_APPRESOURCEPATH, PROP_CHOOSERS, PROP_CHOOSERS_ALL, PROP_CONTROLDESCRIPTORS, PROP_CONTROLDESCRIPTORS_ALL, PROP_DATAHOLDERBOUNDS, PROP_DEFAULTLOCATIONS, PROP_DISPLAYLIST_GROUP, PROP_FIXFILELOCKUP, PROP_JNLPCODEBASE, PROP_JNLPTEMPLATE, PROP_JNLPTITLE, PROP_LOADINGXML, PROP_MAP_GLOBE_LEVEL, PROP_MAP_MAP_LEVEL, PROP_MINIMUMFRAMECYCLETIME, PROP_MONITORPORT, PROP_OLDCONTROLDESCRIPTORS, PROP_ONEINSTANCEPORT, PROP_PREFERENCES, PROP_PROJ_NAME, PROP_RESOURCEFILES, PROP_SHOWCLOCK_DASH, PROP_SHOWCLOCK_VIEW, PROP_SHOWDASHBOARD, PROP_SHOWDATATREE, PROP_SHOWFORMULAS, PROP_SHOWSPLASH, PROP_SPLASHICON, PROP_UI_DESKTOP, PROP_USE_DISPLAYAREA, PROP_USE_TIMEDRIVER, PROP_WINDOW_SCREENSIZEOFFSET, PROP_WINDOW_SIZEHEIGHT, PROP_WINDOW_SIZEWIDTH, PROP_WINDOW_USESCREENSIZE, SUFFIX_BAT, SUFFIX_CPT, SUFFIX_ISL, SUFFIX_JNLP, SUFFIX_RBI, SUFFIX_SH, SUFFIX_XIDV, SUFFIX_XML, SUFFIX_ZIDV

Constructor Summary

Constructors

Constructor and Description
BadNetCDFWidget(NetcdfDataset ncFile, IntegratedDataViewer idv) Handles problems from openDataset.
BadNetCDFWidget(String filepath) Passes through any exception from openDataset - this function doesn't provide an IDV and should only be used for testing.

Method Summary

Modifier and Type	Method and Description
private void	checkSetLatLon() Enable or disable widgets for navigation.
private void	createIDVdisplay() Takes our ncFile and puts it back into IDV (McV).
static void	main(String... args) Tester function to pick a file and send it through the paces.
private void	navCornersAction() One of the two workhorses of our nav chooser, it creates new variables for lat/lon based on the specified cornerpoints and reference variable (for dimensions).
private void	navVarAction() One of the two workhorses of our nav chooser, it alters the chosen (existing) variables so they can be used as lat/lon pairs.
private static float[][]	reshape(float[] arr, int m, int n) Reshape a 1D float array into a 2D float array.
void	showChoices() Displays our "main menu" of choices to fix the given file.
private void	showNavChooser() Shows a window that gives the opportunity to either define coordinate variables or specify corner points.
private void	showNcMLEditor() Creates an editor for NcML and displays it in a window.
private void	showVarPicker() Shows a window that gives a choice of variables.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

private static final org.slf4j.Logger logger

idv

private IntegratedDataViewer idv

ncFile

private NetcdfDataset ncFile

varList

private List<Variable> varList

varNames

private List<String> varNames

NcMLeditor

private JEditorPane NcMLeditor

display

BasicSSCell display

cmaps

ConstantMap[] cmaps

radioLatLonVars

private JRadioButton radioLatLonVars

radioLatLonBounds

private JRadioButton radioLatLonBounds

refComboBox

private JComboBox refComboBox

latComboBox

private JComboBox latComboBox

lonComboBox

private JComboBox lonComboBox

panelLatLonVars

private JPanel panelLatLonVars

panelLatLonBounds

private JPanel panelLatLonBounds

textLatUL

private JTextField textLatUL

textLonUL

private JTextField textLonUL

textLatLR

private JTextField textLatLR

textLonLR

private JTextField textLonLR

Constructor Detail

BadNetCDFWidget

public BadNetCDFWidget(NetcdfDataset ncFile,
                       IntegratedDataViewer idv)

Handles problems from openDataset.

Parameters:

ncFile - NetCDF that caused a problem. Cannot be null.

idv - Reference to the IDV. Cannot be null.

BadNetCDFWidget

public BadNetCDFWidget(String filepath)
                throws IOException

Passes through any exception from openDataset - this function doesn't provide an IDV and should only be used for testing. (Some functionality using the rest of the IDV won't work.)

Parameters:

filepath - Path to a NetCDF file.

Throws:

IOException - if there was a problem.

Method Detail

showChoices

public void showChoices()

Displays our "main menu" of choices to fix the given file. Everything else needed can get called from here.

showNcMLEditor

private void showNcMLEditor()

Creates an editor for NcML and displays it in a window. This includes buttons for saving just the NcML and the full NetCDF file with the changes made.

createIDVdisplay

private void createIDVdisplay()

Takes our ncFile and puts it back into IDV (McV).

showVarPicker

private void showVarPicker()

Shows a window that gives a choice of variables.

reshape

private static float[][] reshape(float[] arr,
                                 int m,
                                 int n)

Reshape a 1D float array into a 2D float array.

Parameters:

arr - Array to reshape.

m - First dimension.

n - Second dimension.

Returns:

arr reshaped into a new 2D array.

showNavChooser

private void showNavChooser()

Shows a window that gives the opportunity to either define coordinate variables or specify corner points. Borrowed heavily from FlatFileChooser's makeNavigationPanel for style.

checkSetLatLon

private void checkSetLatLon()

Enable or disable widgets for navigation.

navVarAction

private void navVarAction()

One of the two workhorses of our nav chooser, it alters the chosen (existing) variables so they can be used as lat/lon pairs.

navCornersAction

private void navCornersAction()

One of the two workhorses of our nav chooser, it creates new variables for lat/lon based on the specified cornerpoints and reference variable (for dimensions).

main

public static void main(String... args)

Tester function to pick a file and send it through the paces.

Parameters:

args - Incoming arguments.